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Table 1 ApoE-associated proteins identified by LC-MS/MS analysis

From: Apolipoprotein E4 (1–272) fragment is associated with mitochondrial proteins and affects mitochondrial function in neuronal cells

Protein

Intracellular localization

Function

   Solute carrier family 25 (mitochondrial carrier, Aralar) member 12

Mitochondria

Calcium-dependent mitochondrial aspartate and glutamate carrier

   Ubiquinol cytochrome c reductase core protein 1

Mitochondria

Mitochondrial electron transport

* Ubiquinol cytochrome c reductase core protein 2 (UQCRC2)

Mitochondria

Mitochondrial electron transport

* Cytochrome C1

Mitochondria

Mitochondrial electron transport

   Cytochrome oxidase subunit II

Mitochondria

Mitochondrial electron transport

* Cytochrome c oxidase subunit IV isoform 1 (COX IV1)

Mitochondria

Mitochondrial electron transport

   ATP synthase, H+ transporting, mitochondrial F1 complex, α subunit, isoform 1

Mitochondria

ATP synthesis

   ATP synthase, H+ transporting, mitochondrial F1 complex, β subunit

Mitochondria

ATP synthesis

   ATP synthase, H+ transporting, mitochondrial F1 complex, δ subunit

Mitochondria

ATP synthesis

   Methylenetetrahydrofolate dehydrogenase (NADP+ dependent)- 1 like

Mitochondria

Folic acid and derivative biosynthetic process

   Syntaxin binding protein 1

Cytoplasm

Modulates exocytosis of dense-core granules

   Nonmuscle myosin heavy chain

Cytoplasm

Actin filament-based movement

   Tubulin, alpha 1A

Cytoplasm

Constituent of microtubules

   RAB3A, member RAS oncogene family

Cytoplasm

Involved in exocytosis by regulating a late step in synaptic vesicle fusion.

   Progesterone receptor membrane component 1

Plasma membrane

Receptor for progesterone

   Cardiotrophin-like cytokine factor 1

Extracellular space

Cell surface receptor linked signal transduction

  1. ApoE4-associated protein bands that were detected with SDS-PAGE were prepared and analyzed as described in the Methods. Asterisks (*) show the apoE-binding proteins identified and characterized in this study.