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Figure 1 | Molecular Neurodegeneration

Figure 1

From: PGC-1alpha downstream transcription factors NRF-1 and TFAM are genetic modifiers of Huntington disease

Figure 1

Graphical representation of single-nucleotide polymorphisms (SNPs) in relation to the exon-intron structure (top) and the Haploview pairwise linkage disequilibrium (LD) structure of part of NRF-1 (bottom). Exons are indicated by solid black boxes, and the numbered vertical lines indicate positions of the SNPs analysed in NRF-1. Haploview plot showing pairwise LD (D' values) for all 15 SNPs based on genotypes of 401 HD patients of the study. Each square plots the level of LD between a pair of SNPs, comparisons between neighboring SNPs are arranged along the first line under the names of the SNPs. Dark grey coloring indicates strong LD, medium grey shading indicates less strong LD, light grey indicates intermediate LD, and white indicates weak LD. LD blocks are framed in black and were classified according to Gabriel et al. (2002).

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