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Table 2 Enriched functional categories for genes differentially regulated by α-synuclein

From: Analysis of striatal transcriptome in mice overexpressing human wild-type alpha-synuclein supports synaptic dysfunction and suggests mechanisms of neuroprotection for striatal neurons

Database identifier

Functional category (Enriched GO and GAD terms)

Number of changed genes

  

up

down

pvalue

MF SP_PIR_KEY

phosphoprotein

49

64

8E-07

BP GO:0007242

intracellular signaling cascade

11

8

5E-02

BP KEGG_PATH

mmu04010:MAPK signaling pathway

5

4

3E-02

BP KEGG_PATH

mmu04020:Calcium signaling pathway

3

5

1E-02

CC GO:0045202

synapse

7

10

3E-06

CC GO:0005856

cytoskeleton

12

10

4E-02

CC GO:0031410

cytoplasmic vesicle/vesicle-mediated transporta

8

7

1E-02

BP GO:0048167

regulation of synaptic plasticity

3

3

4E-04

BP GO:0007267

cell-cell signaling

4

5

3E-02

BP GO:0006897

endocytosis

4

3

5E-02

BP GO:0045941

positive regulation of transcription

5

10

3E-03

BP GO:0042127

regulation of cell proliferation

8

9

2E-03

MF GO:0005520

IGF binding/growth factor bindingb

1

4

7E-03

BP GO:0051259

protein oligomerization

2

3

1E-02

BP GO:0042981

regulation of apoptosis

6

11

2E-03

BP GO:0007610

behavior

10

13

7E-04

BP GO:0007626

locomotory behavior

5

8

4E-03

BP GO:0008344

adult locomotory behavior

1

4

8E-03

BP GO:0007631

feeding behavior

5

7

5E-04

BP GO:0001975

response to amphetamine

2

1

2E-02

BP GO:0030146

diuresis/excretionc

3

1

2E-03

MF GO:0005179

hormone activity

1

5

2E-02

BP GO:0016125

sterol metabolic process/cholesterol metabolismd

5

4

2E-02

BP GO:0030182

neuron differentiation

10

10

9E-07

BP GO:0031175

neuron projection development

7

6

2E-05

BP GO:0001944

vasculature development

2

6

4E-02

D G_A_DB_D

neurological diseases

4

5

5E-02

D G_A_DB_D

diabetes, types 1 and 2

3

6

5E-02

  1. Abbreviations: D: disease; G_A_DB_D:Genetic_Association_DataBase_D; GO: Gene Ontology; BP: Biological process; MF: Molecular function; CC: Cell. component; KEGG_PATH: KEGG_PATHWAY; SP_PIR_KEY: SP_PIR_KEYWORDS;
  2. Notes: a- GO:0016192; b- GO:0019838; c- GO:0007588; d- SP_PIR_KEYWORDS: cholesterol metabolism.