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Table 4 Gene x Environment Interaction: genes altered by MB/PQ in LRRK2-Tg

From: Combined exposure to Maneb and Paraquat alters transcriptional regulation of neurogenesis-related genes in mice models of Parkinson’s disease

Accession

Fold Change

Gene title

Gene symbol

Functional Group

NM_145990

1.32

CDK5 regulatory subunit associated protein 2

Cdk5rap2

Cell differentiation

NM_178591

−1.37

Neuregulin 1

Nrg1

NM_025876

−1.32

CDK5 regulatory subunit associated protein 1

Cdk5rap1

NM_008380

−1.31

Inhibin beta-A

Inhba

NM_013627

−1.29

Paired box gene 6

Pax6

NM_010894

−1.26

Neurogenic differentiation 1

Neurod1

NM_009170

−1.24

Sonic hedgehog

Shh

NM_009871

−1.22

CDK5 regulatory subunit 1 (p35)

Cdk5r1

NM_007540

−1.24

Brain derived neurotrophic factor

Bdnf

Growth factors

NM_009505

−1.23

Vascular endothelial growth factor A

Vegfa

NM_007554

−1.23

Bone morphogenetic protein 4

Bmp4

NM_013904

−1.30

Hairy/enhancer-of-split related with YRPW motif 2

Hey2

Transcription

NM_008900

−1.26

POU domain, class 3, transcription factor 3

Pou3f3

NM_007488

−1.24

Aryl hydrocarbon receptor nuclear translocator 2

Artn2

NM_022312

−1.27

Tenascin R

Tnr

Cell adhesion

NM_010110

−1.21

Ephrin B1

Efnb1

 

NM_183171

−1.21

Fasciculation and elongation protein zeta 1 (zygin I)

Fez1

 

NM_174991

−1.37

Brain-specific angiogenesis inhibitor 1

Bai1

Cell proliferation

NM_010883

−1.21

Norrie disease (pseudoglioma)

Ndph

NM_203491

−1.24

Cholinergic receptor, muscarinic 2

Chrm2

Synaptic functions

NM_009599

−1.21

Acetylcholinesterase

Ache

NM_008744

−1.39

Netrin 1

Ntn1

Cell motility and migration

  1. Comparison of gene expression between mThy-LRRK2(G2019) transgenic mice treated with Maneb/Paraquat, with their corresponding non-transgenic littermates with saline. P<0.05 per Student’s t test. Bold italic fonts denote genes also affected by genetic background or pesticides independently.