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Table 1 Gene-specific primers used for qPCR experiments and genotyping

From: Prophylactic melatonin significantly reduces Alzheimer’s neuropathology and associated cognitive deficits independent of antioxidant pathways in AβPPswe/PS1 mice

Gene

Gene-specific Primers 5’ – 3’

GenBank# or Primer ID

Amplicon Size

Anneal Temp

SOD1

S: ATG GCG ATG AAA GCG GTG TG

NM_011434

460

59 °C

 

AS: GCG CAA TCC CAA TCA CTC CA

   

GPx-1

S: ATG TGT GCT GCT CGG CTC TC

NM_008160

590

60 °C

 

AS: TGC TGG GAC AGC AGG GTT TC

   

CAT

S: AGG TTT GGC CTC ACA AGG AC

NM_009804

239

58 °C

 

AS: GCG GTA GGG ACA GTT CAC AG

   

Nrf2

S: AAC GAC AGA AAC CTC CAT CTA C

NM_010902

94

57 °C

 

AS: AGT AAG GCT TTC CAT CCT CAT C

   

Rp27

S: CCA GGA TAA GGA AGG AAT TCC TCC TG

NM_024277

297

59 °C

 

AS: CCA GCA CCA CAT TCA TCA GAA GG

   

MT1R

GAG TCC AAG TTG CTG GGC AGT GGA

mMT1R-REV-WT

 

94 °C

 

GAA GTT TTC TCA GTG TCC CGC AAT GG

mMT1R-FW-WT

480

 
 

CCA GCT CAT TCC TCC ACT CAT GAT CTA

mMT1R-NEOFW-KO

240

 

MT2R

CCA GGC CCC CTG TGA CTG CCC GGG

mMT2R-FW-WT

 

68 °C

 

CCT GCC ACT GAG GAC AGA ACA GGG

mMT2R-REV-WT

272

 
 

TGC CCC AAA GGC CTA CCC GCT TCC

mMT2R-NEO-REV

550

 

AβPP

AGG ACT GAC CAC TCG ACC AG

oIMR3610

377

52 °C

 

CGG GGG TCT AGT TCT GCA T

oIMR3611

  

Psen1

AAT AGA GAA CGG CAG GAG CA

oIMR1644

608

54 °C

 

GCC ATG AGG GCA CTA ATC AT

oIMR1645

  

Pos Ctrl

CTA GGC CAC AGA ATT GAA AGA TCT

oIMR7338

324

54 °C

 

GTA GGT GGA AAT TCT AGC ATC ATC C

oIMR7339