Table 3 GWAS signal set for rs 11,568,563
chr | GRCh38 location | r2 | D’ | SNP ID | SNP function annotation | Motifs | Regulome DB score |
|---|---|---|---|---|---|---|---|
12 | 21,261,652 | 0.84 | 0.92 | rs188509290 | intergenic | Arid5a, Cdx, Cdx2, Dbx1, Foxa, Foxf1, Foxi1, Foxj2, Foxl1, HDAC2, Ncx, PLZF, Pou2f2, Pou3f4, TATA | 6 |
12 | 21,304,500 | 1 | 1 | rs11568563 | SLCO1A2 missense | Ets, NF-kappaB, Rad21 | 6 |
12 | 21,312,146 | 1 | 1 | rs145667214 | SLCO1A2 intronic | – | ND |
12 | 21,314,281 | 1 | −1 | rs7966334 | SLCO1A2 intronic | BATF, Irf, LBP-9, SRF | ND |
12 | 21,323,155 | 1 | 1 | rs74651308 | SLCO1A2 intronic | CEBPB, Evi-1, Hltf, Mef2, NF-E2, PLZF | ND |
12 | 21,332,593 | 0.98 | 1 | rs79424089 | SLCO1A2 intronic | Nkx2 | ND |