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Table 1 HDP-binding interactors in rpAD high-density fractions identified by mass spectrometry assisted co-immunoprecipitation using anti-PrP antibody

From: Prion protein oligomers cause neuronal cytoskeletal damage in rapidly progressive Alzheimer’s disease

No.

IDs

UniProt Acc. No.

Protein name

Occurrence

Sub-cellular location

Disease Relevance

1

KCC2B

Q13554

Calcium/calmodulin-dependent protein kinase type II subunit beta

rpAD-F12,

sCJD-MM1-F13, 17, sCJD-MM2-F16, 17, sCJD-VV2-F16, 17

C, Ck, Ce, Sr, Sy

Alzheimer’s disease [59]

2

KCC2D

Q13557

Calcium/calmodulin-dependent protein kinase type II subunit delta

rpAD-F12,

sCJD-MM1-F13, 17, sCJD-MM2-F16, 17, sCJD-VV2-F16, 17

Cm, Sl

3

EPDR1

Q9UM22

Mammalian ependymin-related protein 1

rpAD-F12,

sCJD-MM1-F13–16, sCJD-MM2-F13–16, sCJD-VV2-F12, 14, 15

S

Unknown

4

DIRA2

Q96HU8

GTP-binding protein Di-Ras2

rpAD-F13, 15,

sCJD-VV2-F17

Cm

Unknown

5

G2L2

Q8NHY3

GAS2-like protein 2

rpAD-F16

C, Ck

Unknown

6

1433S

P31947

14–3-3 protein sigma

rpAD-F17,

sCJD-VV2-F17

C, Nu, S

Parkinson’s disease [60], Alzheimer’s disease, Creutzfeldt Jakob disease [61], Epilepsy [62]

  1. F12 to F17: HDF-pool 12 to 17. Ce: centrosome, Sy: synapse, Sr: sarcoplasmic reticulum, C: cytoplasm, Ck: cytoskeleton, Nu: nucleus, S: secreted, Cm: cell membrane, Sl: sarcolemma, The localization of proteins and accession number are assigned as in the ExPASy protein database and Uniprot data base, respectively. Disease relevance of the HDP-interacting proteins was identified using Uniprot database search, as well