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Table 2 DeCyder MS analysis for ion trap MS/MS of recombinant parkin exposed to H2O2

From: Oxidation of the cysteine-rich regions of parkin perturbs its E3 ligase activity and contributes to protein aggregation

Domain (Residue #)

Peptide Sequence

Observed (m/z)

Monoiostopioc M r Calculated Observed

Ratio

RING I

246SPVLVFQC(SO2H)NSR256

640.912+

1280.62

1279.81

n/a

(238 - 293)

246SPVLVFQC(SO3H)NSR256

649.422+

1296.61

1296.83

n/a

IBR

349KVTCEGGNGLGC(SO3H)GFAFCR366

623.313+

1865.79

1866.91

3.53

(294 - 417)

350VTC(SO2H)EGGNGLGC(SO3H)GFAFCREC(SO2H)K369

721.513+

2161.82

2161.50

n/a

RING II

421C(SO3H)HVPVEK427

421.932+

842.40

841.84

13.15

(418 - 449)

428NGGC(SO2H)MHM(Oxidation)KCPQPQC(CAM)R442

897.892+

1793.69

1793.77

n/a

Others

90NAAGGC(SO3H)EREPQSLTR104

819.022+

1635.73

1636.03

5.20

(1 - 237)

212C(SO3H)GAHPTSDKETPVALHLIATNSR234

822.403+

2465.20

2464.17

1.65