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Table 2 Primers used for genotyping and quantitative PCR

From: AIF3 splicing switch triggers neurodegeneration

PCR ID

Primers

Sequence

Size (bp)

iCre

CamkIIα-iCre Fw

5’-GACAGGCAGGCCTTCTCTGAA-3’

536

CamkIIα-iCre Re

5’-CTTCTCCACACCAGCTGTGGA-3’

 

AIFflox Fw1

5’-GCTGGACGTAAACTCCTCTTCAGACCT-3’

Homo: 276

AIF3geno

AIFflox Fw2

5’-CACTGAAAAAGTAAACTTGGCCATAGTGCT-3’

Het: 276, 447

AIFflox Re

5’-CCTCTCTGGTCTAAAATGCCAAGCAA-3’

WT: 447

mAIF

mAIF-Fw34

5’-ACGGTGCGTGGAAGGAAAAG-3’

1920

mAIF-Re1953

5’-ATCCCGCCAGGGATGGAAAAG-3’

 

mAIF3

mAIF-Fw2E1/4

5’-GAACCGGCTTCCAGCTACAGAG-3’

348

mAIF-Re648

5’-GTCTGAATTGCAGTGTCTTTG-3’

 

Cytb

Cytochrome b Fw

5’-TTCTGAGGTGCCACAGTTATTAC-3’

180

Cytochrome b Re

5’-GAAGAGGAGGTGAACGATTGC-3’

 

RPS2

RPS2 Fw

5’-CTGACTCCCGACCTCTGGAAA-3’

93

RPS2 Re

5’-GAGCCTGGGTCCTCTGAACA-3’

 

hAIF

hAIF-Fw128

5’-TCGTGCGTGAGAGGAAAGG-3’

665

hAIF-Re761

5’-GTTTGAATCGCAGTGTCTTTG-3’

 

hAIF3

hAIF-Fw2E1/4

5’-GAACCGGCTCCCAGCTTCAGAA-3’

338

hAIF-Re761

5’-GTTTGAATCGCAGTGTCTTTG-3’

 

R26-F2

5’-GCCTCCTGGCTTCTGAGGACCG-3’

WT: 200

Rosa26

R26-R2

5’-TCTGTGGGAAGTCTTGTCCCTCC-3’

KI: 126

SAR-R

5’-CCTGGACTACTGCGCCCTACAGA-3’

 

AIF3KI

mAIF3KI-F

5’-GGGATTGTGCTATGGAACGTC-3’

812

R26-R2

5’-TCTGTGGGAAGTCTTGTCCCTCC-3’

 

Nestin-WT-F

5’-TTGCTAAAGCGCTACATAGGA-3’

WT: 246

Nestin-Cre

Nestin-R

5’-GCCTTATTGTGGAAGGACTG-3’

Cre: 150

Nestin-Mu-F

5’-CCTTCCTGAAGCAGTAGAGCA-3’

 

mAIFGSP1-1951

5’-GCTTGTGTATTCCACGATTGGGATTCA-3’

 

RACE

mAIFGSP2-1787

5’-GGTAGAAGATGACACCTTTGCCGTAGT-3’

 

mAIFGSP3-1009

5’-CCCGCCGATAACTGTAATTGACTTGAC-3’

 

mAIFGSP4-608

5’-GAGGAGGTCGCATGTATGGCAGTTCAG-3’

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