From: Amyloid fibril proteomics of AD brains reveals modifiers of aggregation and toxicity
Protein name | Gene / Protein | Source | Literature | Reference |
---|---|---|---|---|
Heterogeneous ribonucleoproteins | HNRNPA2B1, HNRNPH1 | M, H, T, D, N, F | MS | [63] |
Serine proteases | PRSS1 | M, H, T, D, N | IHC | [64] |
14–3-3 proteins | YWHAB, YWHAG, YWHAQ, YWHAZ, SFN | M, H, T, D, N | MS, BC | |
Ribosomal large subunits | RPL11, UBA52 | M, H, T, D, F | BC, MS | |
Cofilin-1 | CFL1 | H, T, D, N | MS | [63] |
Elongation factor 1-alpha 1 | EEF1A1 | M, T, D, N | MS | |
Heat shock protein 90 family proteins | HSP90AB1 | T, D, N, F | IHC, MS | |
Heat shock protein 70 family proteins | HSPA8, HSPA1L | M, T, D, N | MS | |
Succinate dehydrogenase flavoprotein | SDHA | H, T, D, N | MS | [70] |
Aconitate hydratase | ACO2 | T, D, N | MS | [70] |
Actin, cytoskeletal proteins | ACTA1, ACTA2, ACTG2 | M, H, T | IHC, MS | |
Amyloid-beta precursor protein | APP | M, H, T | IHC, BC, MS | |
Na + /K + transporting ATPase subunits | ATP1A3 | M, T, N | IHC, MS | |
Calcium-transporting ATPase 1, ER | ATP2A2 | T, D, N | IHC | [72] |
Calmodulin-1, -2 | CALM1, CALM2 | H, T, D | IHC, BC, MS | |
CaMKIIÂ subunits | CAMK2A | M, T, N | IHC, MS | |
Clathrin heavy chain 1 | CLTC | T, D, N | MS | |
Dihydropyrimidinase-related proteins | CRMP1, DPYSL2, DPYSL3 | T, D, N | MS | [66] |
Dynamin-1 | DNM1 | T, D, F | MS | |
Desmoplakin | DSP | M, H, T | MS | [75] |
Dyneins, motor proteins | DYNC1H1 | T, N, F | IHC, MS | |
Glyceraldehyde-3-phosphate dehydrogenase | GAPDH | T, D, N | MS | [63] |
Glutamine synthetase | GLUL | T, D, N | MS | [70] |
Guanine nucleotide-binding protein subunits | GNAO1, GNB1, GNB2 | T, D, N | MS | [70] |
Alpha-internexin | INA | T, D, N | IHC, MS | |
Malate dehydrogenase 2 | MDH2 | T, D, N | MS | [66] |
Vesicle-fusing ATPase | NSF | T, D, N | MS | [70] |
Pyruvate dehydrogenase E1 | PDHB | T, D, N | MS | |
Phosphoglycerate kinase | PGK1 | H, T, N | MS | |
Pyruvate kinase | PKM | T, D, N | MS | [70] |
Peroxiredoxins | PRDX6 | T, D, F | MS | [66] |
Ribosomal small subunits | RPS20 | H, D, F | MS | [63] |
Excitatory amino acid transporter 2 | SLC1A2 | M, T, D | MS | [70] |
Synaptosomal-associated protein 25 | SNAP25 | T, D, N | IHC, MS | |
Clathrin coat assembly protein AP180 | SNAP91 | H, T, N | IHC, MS | |
Spectrin alpha chain | SPTAN1 | T, D, F | IHC, MS | |
Thioredoxin | TXN | M, H, T | MS | [77] |
Polyubiquitin-B | UBB, UBC | M, H, T | IHC, MS | |
Ubiquitin C-terminal hydrolase L1 | UCHL1 | H, T, N | BC | [79] |
Voltage-dependent anion channel 1, 2 | VDAC1, VDAC2 | M, T, D | IHC, BC, MS | |
Vimentin | VIM | T, D, N | IHC, MS |