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Table 2 The genetics Of sALS

From: Genetics of amyotrophic lateral sclerosis: an update

Gene

Protein

Chromosomal locus

Variant associated with ALS

APEX1

Apurinic Endonuclease DNA repair enzyme 1

14q11.2

SNP associations

ATXN2

Ataxin-2

12q24.12

Poly Q repeats

CHMP2B

Chromatin Modifying Protein 2B

3p11.2

Mutations

HFE

Haemochromatosis

6p22.2

SNP associations

NEFH

Neuro filament Heavy

22q12.2

Deletion and Insertions

SMN1

Survival Motor Neuron 1

5q12.2-q13.3

Abnormal copy number of genes

SMN2

Survival Motor Neuron 2

5q12.2-q13.3

Abnormal copy number of genes

PON 1,2,3

Paraoxonase

7q21.3

SNP associations and mutations

PRPH

Peripherin

12q13.12

mutations

VEGF

Vascular Endothelial Growth Factor

6p21

Promoter SNP’s

PGRN

Progranulin

17q21.31

Deletions

  1. Although the cause of sALS is not known, the crosslink between genetic and environmental factors may contribute to the pathogenesis of sALS. APEX1, ATXN2, CHMP2B, HFE, NEFH, SMN1, SMN2, PON 1, PON2, PON3, PRPH, VEGF and PGRN are some of the genes associated with sALS. Single Nucleotide Polymorphisms (SNP’s), Polyglutamine (Poly Q) repeats, abnormal copy number of genes, deletion and insertion mutations are some of the associations found with the genes known to cause sporadic ALS.
  2. Abbreviations for Table 2: APEX1 Apurinic Endonuclease DNA repair enzyme 1, ATXN2 Ataxin-2, CHMP2B Charged multivesicular body protein 2B, HFE Haemochromatosis, NEFH Neuro filament Heavy, SMN Survival Motor Neuron, PON Paraoxonase, PRPH Peripherin, VEGF Vascular Endothelial Growth Factor, PGRN Progranulin.